A team from CEITEC Masaryk University (MUNI) in collaboration with researchers from two research institutes in Norway has, for the first time, captured how echovirus 18, a member of the enterovirus genus, releases its genetic material into cells to initiate infection. The study provides a structural view of an early stage of viral infection under near-native conditions. Using cryo-electron microscopy, the researchers discovered that the virus does not release its RNA through a small pore in its capsid, as had long been assumed. Instead, its protein shell partially disassembles, creating a large opening through which the viral genetic material escapes into the host cell. A detailed understanding of this genome release mechanism could eventually help develop compounds preventing enteroviruses from infecting cells.Enteroviruses are common human pathogens causing diseases ranging from the common cold and gastrointestinal infections to severe neurological disorders. Echovirus 18, the virus investigated in this study, is known primarily as a cause of meningitis and encephalitis in children. It belongs to the picornaviruses, a family of small, non-enveloped viruses whose genetic material is protected by a protein shell, the capsid, organized with icosahedral symmetry.To replicate within a cell, the enteroviruses must release their RNA – the molecule that carries viral genetic information – from the capsid, into the cell cytoplasm. Although this step is crucial for initiating infection, it has never been observed in infected cells.<img src="https://storage.googleapis.com/labrulez-bucket-strapi-h3hsga3/CEITEC_Vedci_z_CEITEC_jako_prvni_zachytili_jak_enteroviry_spousteji_infekci_bunek_71d553bb0e.jpg" alt="CEITEC/Plevka Lab: CEITEC Scientists Are the First to Capture How Enteroviruses Initiate Infection: View into a cell infected by echovirus 18. Echovirus 18 is shown in green and yellow, ribosomes in violet, and actin filaments in cyan. Scale 50 nm. " srcset="https://storage.googleapis.com/labrulez-bucket-strapi-h3hsga3/thumbnail_CEITEC_Vedci_z_CEITEC_jako_prvni_zachytili_jak_enteroviry_spousteji_infekci_bunek_71d553bb0e.jpg 221w," sizes="100vw" width="1600" height="1128">“For a long time, two main theories existed about how picornaviruses deliver their RNA genomes into cells. One proposed that the genome leaves the capsid through a small opening. The other, supported by earlier work from our laboratory, suggested that the genome escapes from partially disassembled capsids missing pentamers of capsid proteins. However, both models were based on experiments with virus particles outside cells. We wanted to go one step further and see what really happens during infection inside a cell,” says <a target="_blank" rel="noopener noreferrer" href="https://www.ceitec.eu/liya-mukhamedova-ph-d/u89248?page=publication">Liya Mukhamedova</a>, the study’s first author from CEITEC MUNI.Using cryo-electron microscopy, which allows scientists to visualize biological structures at exceptionally high resolution, the researchers observed individual echovirus 18 particles directly within infected cells. They discovered that empty virus particles in infected cells lack parts of their capsids. It is through these openings that the virus releases its RNA.The study also revealed the role of the FcRn receptor, a cell-surface molecule that enteroviruses use to enter cells. The binding of the virus to the receptor triggers structural changes in the viral particle that prime it for subsequent genome release. The team showed that receptor binding causes the loss of the so-called pocket factor, a small molecule that normally helps stabilize the virus particle. The virus otherwise remains largely intact, suggesting that receptor binding is only the first step toward uncoating, while additional factors within the cell are required to complete the process and trigger genome release.“Infection is a complex process, during which enterovirus particles sense various interactions with cell components. The binding of echovirus 18 to the FcRn host-cell receptor triggers conformational changes in the virus, priming it for genome release.” – explains <a target="_blank" rel="noopener noreferrer" href="https://www.ceitec.eu/pavel-plevka-ph-d/u26854">Pavel Plevka</a>, head of the Structural Virology Research Group.The researchers did not observe the so-called activated particles that are key intermediates in the enterovirus uncoating process. This suggests that genome release in cells occurs much faster than previous experiments had suggested.By combining structural data obtained from studies of virus particles outside living cells with observations of infected cells, the study offers a picture of how enterovirus infection begins. Moving beyond simplified experiments with isolated virus particles, it brings scientists closer to understanding the earliest stages of enterovirus infection as they occur in living cells. The study, was published in the <a target="_blank" rel="noopener noreferrer" href="https://doi.org/10.1073/pnas.2601182123">PNAS journal</a>.<img src="https://storage.googleapis.com/labrulez-bucket-strapi-h3hsga3/CEITEC_Vedci_z_CEITEC_jako_prvni_zachytili_jak_enteroviry_spousteji_infekci_bunek_2_3601bf1df9.jpg" alt="CEITEC/Plevka Lab: CEITEC Scientists Are the First to Capture How Enteroviruses Initiate Infection: Reconstructions of E18 particles from infected cells. The particles are rainbow-colored based on the distance from the particle center. Scale 10 nm." srcset="https://storage.googleapis.com/labrulez-bucket-strapi-h3hsga3/thumbnail_CEITEC_Vedci_z_CEITEC_jako_prvni_zachytili_jak_enteroviry_spousteji_infekci_bunek_2_3601bf1df9.jpg 245w," sizes="100vw" width="1600" height="906"><blockquote><h4>Article</h4><h4><a target="_blank" rel="noopener noreferrer" href="https://www.pnas.org/doi/10.1073/pnas.2601182123">Particles of echovirus 18 open to release their genomes in vivo</a></h4>Liya Mukhamedova, David Buchta, Zuzana Trebichalská, Yevgen Levdansky, Jana Moravcová, David Potěšil, Zbyněk Zdráhal, Dominik Hřebík, Lucie Nepovímová, Torleif Tollefsrud Gjølberg, Jan Terje Andersen, Jiří Nováček, Tibor Füzik, and Pavel PlevkaProc. Natl. Acad. Sci. U.S.A., 2026, 123, e2601182123<div>&nbsp;</div><div><a target="_blank" rel="noopener noreferrer" href="https://doi.org/10.1073/pnas.2601182123">https://doi.org/10.1073/pnas.2601182123</a></div><h6>licenced under <a target="_blank" rel="noopener noreferrer" href="https://creativecommons.org/licenses/by/4.0/">CC-BY 4.0</a></h6></blockquote><h4>Abstract</h4>Enteroviruses cause a broad spectrum of human diseases, ranging from mild respiratory or gastrointestinal infections to severe neurological disorders such as aseptic meningitis and encephalitis. Enterovirus cell entry involves receptor-mediated endocytosis followed by destabilizing rearrangements of the virus capsid that enable genome release. However, the mechanism of enterovirus genome release has not been visualized in infected cells. Here, we used cryoelectron tomography and microscopy to image echovirus 18 (E18) entry into host cells and its interaction with the neonatal Fc receptor (FcRn). 30 min postinfection, endosomes and cytoplasm contained empty capsids missing one or several pentamers of capsid proteins, providing evidence that in vivo E18 releases its genome through capsid opening. In vitro, FcRn binding induced the expulsion of pocket factors from hydrophobic pockets in VP1, priming the virus for uncoating. The cryoelectron microscopy reconstruction of genome-containing particles of E18 inside infected cells did not reveal pocket factors, indicating that receptor binding triggers the same priming process during infection. We did not detect activated particles in infected cells, suggesting that these intermediates are short-lived and rapidly release their genomes in vivo. Our results identify capsid opening as the in vivo mechanism of echovirus 18 genome release, providing structural evidence for a process previously only inferred from in vitro experiments.

CEITEC Scientists Are the First to Capture How Enteroviruses Initiate Infection 

Gas chromatography (GC) is a powerful analytical technique used to separate and analyze compounds in a mixture. Whether you're working in pharmaceuticals, environmental testing, or food safety, understanding the key components of a gas chromatograph is essential for accurate and efficient results.In this article, we will delve into the primary components of gas chromatography, including the injector, column, detector, and carrier gas—and explain how each plays a critical role in the separation and analysis process.By mastering these elements, you can optimize your GC setup for precise and reliable outcomes. Let's explore each component in detail:<h3>Sample Injector</h3>The injector is the starting point in the <a target="_blank" rel="noopener noreferrer" href="https://www.phenomenex.com/techniques/gc">gas chromatography process</a>, where the sample is introduced into the system. In GC, the sample must be vaporized into a gas before it enters the column. The injector serves this purpose by heating the sample to its gaseous state. There are many types of injectors, Split/Splitless, PTV, on column.The most common injector is the Split/Splitless injector that can be used in split mode or in splitless mode:<ul><li>Split Injection: This mode allows a portion of the sample to be sent to the column while the remainder is vented. It is useful for high-concentration samples to prevent system overload.</li><li>Splitless Injection: In this mode, the entire sample is introduced into the column, making it ideal for trace analysis where even minute quantities need detection.</li></ul>Proper choice of injector type and proper control of injection conditions, such as temperature, sample size, injection mode are crucial for achieving reproducible and reliable results.<h3>Carrier Gas</h3>In gas chromatography, the mobile phase is represented by carrier gas, which transports the vaporized sample through the column. The carrier gas is an inert gas, such as helium, nitrogen, or hydrogen. The choice of carrier gas can influence the efficiency of the separation process.<ul><li>Helium is the most used carrier gas due to its inertness and high flow rate.</li><li>Hydrogen offers faster analysis times but requires careful handling due to its flammability.</li><li>Nitrogen provides a cheaper solution compared to Helium, although it's slower than helium or hydrogen.</li></ul>The flow rate and pressure of the carrier gas need to be carefully controlled to ensure that the sample moves smoothly through the system and adequate efficiency is generated.<h3>Column/Stationary Phase</h3>The column is the heart of the gas chromatograph, where the actual separation of compounds occurs. <a target="_blank" rel="noopener noreferrer" href="https://labrulez.com/en-us/gcms/products?category=7&amp;manufacturerItems=50">GC columns</a> are typically long, thin tubes made from stainless steel or fused silica. They are coated with a stationary phase, which interacts with the components of the sample as they pass through.<ul><li>Packed Columns: These contain small particles of stationary phase material and generally have a larger volume. While they are less efficient than capillary columns, they can be suitable for specific applications.</li><li>Capillary Columns: These thin tubes are coated with a stationary phase, offering higher resolution and faster analysis times due to their smaller diameter.</li></ul>The length, diameter, and type of stationary phase of the column are important factors that affect the efficiency and selectivity of the separation. The choice of stationary phase (polar or non-polar; liquid-coated or solid) affects how different compounds interact with it.As the sample moves through the column, compounds separate based on volatility and their affinity for the stationary phase, resulting in distinct peaks in the chromatogram.<h3>Detector</h3>Once the sample has passed through the column, it reaches the detector, where individual components are identified and measured. There are several types of detectors, each suited to different applications:<ul><li>Flame Ionization Detector (FID): One of the most commonly used detectors in GC. It measures ions produced when organic compounds are burned in a hydrogen-air flame. FID is highly sensitive to a wide range of organic compounds and offers a broad linear dynamic range.</li><li>Thermal Conductivity Detector (TCD): Detects changes in the thermal conductivity of the gas stream as analytes elute from the column. It is a universal, non-destructive detector, but is generally less sensitive than FID.</li><li>Electron capture detector (ECD): A very sensitive and selective detector used to detect chlorinated compounds it is easily contaminated and requires very pure and dry carrier and makeup gases and difficult maintenance.</li><li>Mass Spectrometer (MS): Provides structural information, aiding in both identification and quantification. Requires advanced and trained users and it’s difficult to maintain.</li></ul>The choice of detector depends on the type of analysis being performed and the sensitivity required. Each detector converts physical or chemical changes associated with the analytes into a measurable signal, producing a chromatogram that reflects concentration and retention time.<h3>Data System</h3>Although not a physical part of the chromatograph, the data system plays an integral role in processing and interpreting the signals generated by the detector. Modern gas chromatographs are equipped with software that converts detector signals into chromatograms—visual representations of the separation process. The software allows users to quantify and identify the components of the sample based on retention times and peak areas.<h3>How to Read a Gas Chromatogram?</h3>Interpreting a gas chromatogram involves understanding its essential elements, such as peaks, retention times, and the overall data for qualitative and quantitative analysis.<h4>The Nature of the Sample</h4>Begin by considering the sample's characteristics; different samples, such as environmental pollutants or food components, may exhibit distinct peak patterns. Recognizing the baseline (the flat line representing the signal without analytes) is crucial for identifying peaks accurately. While well-defined peaks indicate successful separation of components, poorly shaped or broad peaks may suggest issues with the separation process. For instance, if a mixture is injected and three peaks are observed, it indicates the presence of three different compounds in the sample. Conversely, when evaluating the purity of a sample, one would anticipate observing a single peak. Ideally, the chromatogram should reflect this expectation, confirming the sample's purity.<h4>The Identity of the Sample</h4>Retention time (Rt) is a critical factor in identifying the compounds present in the sample. Each analyte has a characteristic retention time that can be compared to known standards or literature. To confirm identities, a standard mixture should run alongside the sample; this allows to correlate retention times with specific compounds. If available, utilizing MS in conjunction with gas chromatography (GC-MS) can provide additional structural information, enhancing identification accuracy. With HR-MS or MS-MS detectors, unknown compounds can be identified by matching perfectly the Molecular weight or by matching the fragmentation pattern.<h4>The Amount of Sample</h4>Quantifying analytes involves analyzing peak area or height, which is directly proportional to the concentration of the analyte in the sample. A calibration curve constructed from known concentrations can help relate peak areas to actual concentrations. It is essential to consider the detector’s sensitivity and the limits of detection, as peaks below a certain threshold may not provide reliable quantification.

Basic Principles of Gas Chromatography - Separation and Analysis

ISC 2026 - Day 2

Article

Events

Academy

Science and research

Since its establishment in 2011, CEITEC has quickly developed into a cutting-edge infrastructure for research which performs highly alongside the best institutes in Europe. Among the main priorities of CEITEC are the promotion of a motivating and dynamic international scientific environment, the provision of state-of-the-art research infrastructure, and the policy of open communication and equal opportunities.

CEITEC

Phenomenex is a global technology leader committed to developing novel analytical chemistry solutions that solve the separation and purification challenges of researchers in industrial, government and academic laboratories.

Phenomenex

The International Symposium on Chromatography (ISC) represents the oldest conference series focussing on separation science. ISC symposia have been organised since 1956 in each even year. ISC is internationally recognised as one of the premier meeting series for discussion of all modes of chromatography and separation science with a broad coverage of techniques and applications.

International Symposium on Chromatography - (ISC)

LECO Multi-Mode Source

Multi-Mode Source (MMS) integrates EI, PCI, and NCI/ECNI in a single GC-MS ion source, enabling instant software-based mode switching with perfect peak alignment and enhanced unknown identification.

The innovative Multi-Mode Source (MMS) integrates the strengths of the three most widely used GC-MS ionization techniques—Electron Ionization (EI), Positive Chemical Ionization (PCI), and Negative Chemical Ionization (NCI/ECNI)—into a single, easy-to-use source. With MMS, switching ionization modes is software-controlled and instantaneous, eliminating hardware changes and alignment concerns.Paired with the <a target="_blank" rel="noopener noreferrer" href="https://gcms.labrulez.com/products/38">Pegasus GC-HRT+</a>, MMS delivers excellent mass accuracy and high resolution for pseudo-molecular ions, complementing traditional high-resolution EI (HR-EI) to enable comprehensive characterization of unknown compounds. Because the hardware remains untouched during mode changes, chromatographic peaks stay perfectly aligned across ionization modes—simplifying comparison and interpretation.All three ionization modes (EI, PCI, NCI/ECNI) are available for both GC-MS and GC×GC-MS workflows on the <a target="_blank" rel="noopener noreferrer" href="https://gcms.labrulez.com/products/39">Pegasus GC-HRT+ 4D</a> as well as the Pegasus GC-HRT+ systems.<h3>Key Benefits</h3><ul><li>Three ionization modes in one source: EI, PCI, and NCI/ECNI</li><li>No hardware swapping or realignment: mode changes at the click of a button</li><li>Consistent peak alignment across ionization modes</li><li>Enhanced unknown identification via complementary EI and CI information</li><li>Compatible with GC-MS and GC×GC-MS on Pegasus GC-HRT+ platforms</li></ul><img src="https://storage.googleapis.com/labrulez-bucket-strapi-h3hsga3/LECO_Multi_Mode_Source_2_79908249a5/LECO-Multi-Mode-Source-2.jpg" alt="LECO: Multi-Mode Source for the Pegasus GC-HRT+ and Pegasus GC-HRT+ 4D" srcset="https://storage.googleapis.com/labrulez-bucket-strapi-h3hsga3/thumbnail_LECO_Multi_Mode_Source_2_79908249a5/thumbnail_LECO-Multi-Mode-Source-2.jpg 245w," sizes="100vw" width="1817" height="1082">

LECO PEGASUS BT GC-TOFMS

Compact GC-TOFMS delivering full mass range data in every run, high sensitivity, NonTarget Deconvolution® and StayClean® EI source for reliable non-target and routine GC-MS analysis.

The Pegasus BT GC-TOFMS is a compact, high-performance benchtop gas chromatography time-of-flight mass spectrometer designed to deliver comprehensive chemical information with exceptional sensitivity, speed, and reliability. It combines advanced TOF mass spectrometry hardware with LECO’s powerful <a target="_blank" rel="noopener noreferrer" href="https://gcms.labrulez.com/products/41">ChromaTOF® software</a> to support both routine and advanced analytical workflows.<img src="https://storage.googleapis.com/labrulez-bucket-strapi-h3hsga3/LECO_Pegasus_BT_2_bc8a8d0505.jpg" alt="LECO PEGASUS BT GC-TOFMS" srcset="https://storage.googleapis.com/labrulez-bucket-strapi-h3hsga3/thumbnail_LECO_Pegasus_BT_2_bc8a8d0505.jpg 238w," sizes="100vw" width="932" height="612">Designed for laboratories that need to analyze more samples, generate more data, and achieve results faster, the Pegasus BT acquires full-range mass spectral data in every run—ensuring that no analytes are missed, even in highly complex matrices. Industry-leading sensitivity, combined with NonTarget Deconvolution® (NTD®), enables confident identification and quantification of both known and unknown compounds by effectively separating co-eluting peaks and minimizing matrix interferences.<img src="https://storage.googleapis.com/labrulez-bucket-strapi-h3hsga3/LECO_PEGASUS_BT_GC_TOFMS_7_be16be31ec.jpg" alt="LECO PEGASUS BT GC-TOFMS: NonTarget Deconvolution® (NTD®) Automated deconvolution ensures that coeluting peaks and matrix interferences don't hinder your analyses.StayClean Ion Source Open-style EI source virtually eliminates downtime associated with source cleaning*, which means you can spend your time running more samples. *Even after 3,000 sludge injections, source has not needed cleaning." srcset="https://storage.googleapis.com/labrulez-bucket-strapi-h3hsga3/thumbnail_LECO_PEGASUS_BT_GC_TOFMS_7_be16be31ec.jpg 245w," sizes="100vw" width="768" height="432">The system features LECO’s proven StayClean® open-style EI ion source, which virtually eliminates downtime associated with source cleaning and allows extended operation even with challenging sample matrices. Its compact benchtop footprint makes the Pegasus BT an ideal solution for laboratories with limited space, without compromising analytical performance.<img src="https://storage.googleapis.com/labrulez-bucket-strapi-h3hsga3/LECO_PEGASUS_BT_GC_TOFMS_6_047f81e642.jpg" alt="LECO PEGASUS BT GC-TOFMS: " srcset="https://storage.googleapis.com/labrulez-bucket-strapi-h3hsga3/thumbnail_LECO_PEGASUS_BT_GC_TOFMS_6_047f81e642.jpg 245w," sizes="100vw" width="616" height="375">Fully integrated ChromaTOF® software provides automated deconvolution, quantification, reporting, batch processing, and long-term data mining. The Pegasus BT GC-TOFMS is ideally suited for pesticide analysis, metabolomics, petroleum and fuel characterization, food, flavor, and fragrance analysis, and other demanding GC-MS applications.<img src="https://storage.googleapis.com/labrulez-bucket-strapi-h3hsga3/LECO_PEGASUS_BT_GC_TOFMS_2_cc1a963b9e.jpg" alt="LECO PEGASUS BT GC-TOFMS: ChromaTOF® software" srcset="https://storage.googleapis.com/labrulez-bucket-strapi-h3hsga3/thumbnail_LECO_PEGASUS_BT_GC_TOFMS_2_cc1a963b9e.jpg 245w," sizes="100vw" width="943" height="566"><h3>Key Features</h3><ul><li>Benchtop GC-TOFMS with full-range mass spectral acquisition in every analysis</li><li>Industry-leading sensitivity for trace-level detection</li><li>NonTarget Deconvolution® (NTD®) for reliable separation of co-eluting compounds and suppression of matrix interferences</li><li>StayClean® open-style EI ion source for minimal maintenance and reduced downtime</li><li>High sample throughput with excellent repeatability</li><li>Compact footprint with uncompromised analytical performance</li></ul><img src="https://storage.googleapis.com/labrulez-bucket-strapi-h3hsga3/LECO_PEGASUS_BT_GC_TOFMS_5fd6d4a332.jpg" alt="LECO PEGASUS BT GC-TOFMS" srcset="https://storage.googleapis.com/labrulez-bucket-strapi-h3hsga3/thumbnail_LECO_PEGASUS_BT_GC_TOFMS_5fd6d4a332.jpg 245w," sizes="100vw" width="1220" height="591"><h3>Applications</h3><ul><li>Pesticides and environmental contaminants</li><li>Petroleum products, fuels, and fuel marker analysis</li><li>Metabolomics and non-target screening</li><li>Food, flavor, and fragrance analysis</li><li>Characterization of complex matrices and unknown identification</li></ul><h5>&nbsp;Calibration curve in strawberry matrix: Cyprodinil</h5><img src="https://storage.googleapis.com/labrulez-bucket-strapi-h3hsga3/LECO_PEGASUS_BT_GC_TOFMS_3_6a4f0ecc50.jpg" alt="LECO PEGASUS BT GC-TOFMS: The calibration curve at left shows excellent linearity, and sensitivity easily meets all standard requirements." srcset="https://storage.googleapis.com/labrulez-bucket-strapi-h3hsga3/thumbnail_LECO_PEGASUS_BT_GC_TOFMS_3_6a4f0ecc50.jpg 245w," sizes="100vw" width="871" height="480"><h5>Characterization of fuel markers at trace levels is easy and routine</h5><img src="https://storage.googleapis.com/labrulez-bucket-strapi-h3hsga3/LECO_PEGASUS_BT_GC_TOFMS_4_33217d7f2e.jpg" alt="LECO PEGASUS BT GC-TOFMS: Full TIC chromatogram of a spiked commercial diesel sample." srcset="https://storage.googleapis.com/labrulez-bucket-strapi-h3hsga3/thumbnail_LECO_PEGASUS_BT_GC_TOFMS_4_33217d7f2e.jpg 237w," sizes="100vw" width="742" height="489">

LECO PEGASUS BT 4D GC×GC-TOFMS

LECO PEGASUS BT 4D GC×GC-TOFMS combines comprehensive two-dimensional GC with fast TOFMS to improve separation, sensitivity, and confidence in qualitative and quantitative analysis of complex samples.

The LECO PEGASUS BT 4D GC×GC-TOFMS is a high-performance benchtop system that combines comprehensive two-dimensional gas chromatography (GC×GC) with time-of-flight mass spectrometry (TOFMS) to deliver unmatched separation power, sensitivity, and confidence in compound identification. Designed for laboratories facing highly complex samples, the PEGASUS BT 4D enables qualitative and quantitative analysis in a single run while maximizing productivity and data quality.By coupling GC×GC separation with fast TOFMS acquisition, the system dramatically increases chromatographic peak capacity and resolves co-eluting compounds that are difficult or impossible to distinguish by conventional 1D GC-MS. Enhanced signal-to-noise ratios translate into lower detection limits, improved linearity, and more reliable quantification—even in challenging matrices.<h3>What GC×GC Brings to Your Analysis</h3>GC×GC modulation refocuses and reinjects analytes from the first column into a second column with a different stationary phase, providing structured chromatograms that improve interpretability of complex data. This approach improves both separation efficiency and interpretability of results, allowing you to identify more compounds with greater confidence and consistency.<img src="https://storage.googleapis.com/labrulez-bucket-strapi-h3hsga3/LECO_PEGASUS_BT_4_D_G_Cx_GC_TOFMS_c9ad0bd186.jpg" alt="LECO PEGASUS BT 4D GC×GC-TOFMS" srcset="https://storage.googleapis.com/labrulez-bucket-strapi-h3hsga3/thumbnail_LECO_PEGASUS_BT_4_D_G_Cx_GC_TOFMS_c9ad0bd186.jpg 245w," sizes="100vw" width="1029" height="594"><h3>Confident Identification and Quantification</h3>The PEGASUS BT 4D excels in both comprehensive screening and targeted applications. Spectral deconvolution combined with high-speed TOFMS acquisition reveals analytes present in complex matrices, while GC×GC separation minimizes matrix interferences for superior quantitative performance. What was once a marginal library match in GC-MS becomes a confident identification in GC×GC-TOFMS.<img src="https://storage.googleapis.com/labrulez-bucket-strapi-h3hsga3/LECO_PEGASUS_BT_4_D_G_Cx_GC_TOFMS_2_4e033e866c.jpg" alt="LECO PEGASUS BT 4D GC×GC-TOFMS: Quantitative analysis using the Pegasus BT 4D" srcset="https://storage.googleapis.com/labrulez-bucket-strapi-h3hsga3/thumbnail_LECO_PEGASUS_BT_4_D_G_Cx_GC_TOFMS_2_4e033e866c.jpg 245w," sizes="100vw" width="1443" height="637"><img src="https://storage.googleapis.com/labrulez-bucket-strapi-h3hsga3/LECO_PEGASUS_BT_4_D_G_Cx_GC_TOFMS_3_18eebd600d.jpg" alt="LECO PEGASUS BT 4D GC×GC-TOFMS: Qualitative analysis using the Pegasus BT 4D" srcset="https://storage.googleapis.com/labrulez-bucket-strapi-h3hsga3/thumbnail_LECO_PEGASUS_BT_4_D_G_Cx_GC_TOFMS_3_18eebd600d.jpg 210w," sizes="100vw" width="1442" height="1069"><h3>Robust Design for High-Throughput Labs</h3>Equipped with LECO’s proven StayClean® ion source, the PEGASUS BT 4D minimizes routine maintenance and downtime, even when analyzing dirty or complex samples. Integrated with ChromaTOF® software, the system provides seamless instrument control, automated data processing, and powerful qualitative and quantitative tools within a single platform.<img src="https://storage.googleapis.com/labrulez-bucket-strapi-h3hsga3/LECO_PEGASUS_BT_4_D_G_Cx_GC_TOFMS_c2644cd38e.jpg" alt="LECO - PEGASUS BT 4D GCxGC-TOFMS.jpg" srcset="https://storage.googleapis.com/labrulez-bucket-strapi-h3hsga3/thumbnail_LECO_PEGASUS_BT_4_D_G_Cx_GC_TOFMS_c2644cd38e.jpg 202w," sizes="100vw" width="1099" height="849"><h3>Key Benefits</h3><ul><li>Exceptional chromatographic resolution and peak capacity with GC×GC</li><li>Enhanced sensitivity and lower detection limits through modulation-based signal focusing</li><li>High-speed TOFMS acquisition for accurate deconvolution of narrow GC×GC peaks</li><li>Reliable identification and quantification of analytes</li><li>Reduced maintenance with the StayClean® ion source</li><li>Fully integrated ChromaTOF® software for acquisition, processing, and reporting</li></ul><h3>Applications</h3>The LECO PEGASUS BT 4D GC×GC-TOFMS is ideally suited for demanding applications across environmental analysis, petrochemical and energy research, food and flavor/fragrance analysis, forensics, life sciences, and metabolomics—anywhere complex mixtures require maximum separation power and analytical confidence.<img src="https://storage.googleapis.com/labrulez-bucket-strapi-h3hsga3/LECO_PEGASUS_BT_4_D_G_Cx_GC_TOFMS_4_8e8ec115ec.jpg" alt="LECO PEGASUS BT 4D GCxGC-TOFMS: Excellent Sensitivity" srcset="https://storage.googleapis.com/labrulez-bucket-strapi-h3hsga3/thumbnail_LECO_PEGASUS_BT_4_D_G_Cx_GC_TOFMS_4_8e8ec115ec.jpg 244w," sizes="100vw" width="974" height="625">With the PEGASUS BT 4D, you can predict, quantify, and identify more compounds with confidence, turning complex data into clear, actionable results.<img src="https://storage.googleapis.com/labrulez-bucket-strapi-h3hsga3/LECO_PEGASUS_BT_4_D_G_Cx_GC_TOFMS_5_625fed2f0d.jpg" alt="LECO PEGASUS BT 4D GCxGC-TOFMS: Identify MORE with confidence/non-target analysis" srcset="https://storage.googleapis.com/labrulez-bucket-strapi-h3hsga3/thumbnail_LECO_PEGASUS_BT_4_D_G_Cx_GC_TOFMS_5_625fed2f0d.jpg 240w," sizes="100vw" width="1034" height="672">

LECO Pegasus GC-HRT+

Ultra-high-resolution GC-TOFMS with up to 50,000 FWHM, <1 ppm mass accuracy, and 200 spectra/s. Pegasus GC-HRT+ delivers unmatched sensitivity and confident identification in complex samples.

Now with even higher sensitivity, the Pegasus GC-HRT+ is designed to meet the most demanding analytical challenges. This high-performance GC-TOFMS delivers industry-leading mass accuracy, full-range acquisition at exceptional speed, precise isotopic abundance, and ultra-high mass resolution—all within a single injection.Folded Flight Path (FFP) technology combined with a novel data acquisition system enables up to 50,000 FWHM resolution, &lt;1 ppm mass accuracy, and acquisition rates up to 200 spectra/s, supporting rich analyte discovery and high-confidence identification in highly complex samples.<h3>Key features</h3><ul><li>Mass accuracy ≤1 ppm with peak capacity at least 2× higher than conventional MS platforms</li><li>Encoded Frequent Pushing (EFP) for markedly increased sensitivity, expanded dynamic range, and wide mass range</li><li>Folded Flight Path (FFP) technology for ultra-high resolution, enhanced sensitivity, and advanced TOF focusing</li><li>KADAS® ion-statistics-based acquisition to reduce noise, ensure mass accuracy, and minimize file size</li><li>Ultra High Resolution + HRD to resolve highly isobaric ions (mass differences ~0.02 amu)</li><li>Multi-Mode Source (MMS): EI, Positive CI, and ECNI in one system</li></ul><h3>Models</h3><ul><li>Pegasus GC-HRT+ – Full-scale GC-TOFMS</li></ul><h3>Options</h3><ul><li><a target="_blank" rel="noopener noreferrer" href="https://gcms.labrulez.com/products/82">L-PAL3 Automated Sample Injector</a></li></ul>

LECO Pegasus GC-HRT+ 4D

High-resolution GC×GC-TOFMS system combining extreme separation power, up to 200 spectra/s acquisition, and advanced HR deconvolution for confident identification of unknowns in complex samples.

The Pegasus GC-HRT+ 4D from LECO combines comprehensive two-dimensional gas chromatography (GC×GC) with high-resolution time-of-flight mass spectrometry (TOFMS) and advanced High-Resolution Deconvolution (HRD). Designed for the most complex sample matrices, the system enables detection, separation, and confident identification of more analytes than ever before. <a target="_blank" rel="noopener noreferrer" href="https://gcms.labrulez.com/products/41">ChromaTOF® software</a>, purpose-built for HRT+ instrumentation and GC×GC workflows, integrates advanced qualitative and quantitative tools into a single, user-friendly data system.<h3>Key Features</h3><ul><li>Compact benchtop design that saves valuable laboratory space</li><li>Industry-leading sensitivity with proprietary deconvolution algorithms for clean, high-quality spectra</li><li>High acquisition speed up to 200 spectra/s to properly define ultra-narrow GC×GC peaks (&lt;200 ms)</li><li>Complete historical mass-spectral record retained for future data mining and reprocessing</li><li>Proven Pegasus reliability and durability in a modern, space-efficient format</li></ul><h3>GC×GC Performance Explained</h3>GC×GC achieves exceptionally high peak capacity by trapping compounds eluting from the first column and reinjecting them into a second column for rapid secondary separation. These second-dimension separations occur within seconds, producing extremely narrow peaks that demand very high spectral acquisition rates. The Pegasus GC-HRT+ 4D meets and exceeds this requirement, enabling robust spectral deconvolution and confident compound identification in highly complex samples.<h3>Available Configurations</h3><ul><li>Pegasus GC-HRT+ 4D with Liquid Nitrogen Thermal Modulator</li><li>Pegasus GC-HRT+ 4D with Cryogen-Free Modulator</li></ul><h3>Optional Accessories</h3><ul><li><a target="_blank" rel="noopener noreferrer" href="https://gcms.labrulez.com/products/82">L-PAL3 Autosampler</a></li></ul>

LECO ChromaTOF Software

ChromaTOF is LECO’s advanced GC and GC×GC analytical software, offering fully integrated instrument control, powerful deconvolution, and high-end qualitative and quantitative analysis for TOFMS data.

ChromaTOF is proprietary analytical software developed by LECO specifically for GC-TOFMS and GC×GC-TOFMS workflows. It is purpose-built to handle the extremely large datasets generated by time-of-flight mass spectrometers and to fully support multidimensional chromatography (GC×GC) in a single, integrated data system.ChromaTOF provides seamless instrument and accessory control, highly integrated qualitative and quantitative data processing, and an intuitive user interface. It was the first mass spectrometry data system to natively accommodate GC×GC data and remains a reference platform for advanced GC and GC×GC analysis.<h3>What Makes ChromaTOF Unique</h3><ul><li>Automatic saving of all data processing steps directly within the file system</li><li>Integrated storage and management of metadata and instrument data</li><li>All standard features included in a single software package</li><li>Built-in control for compatible options, activated only when needed</li><li>Easy-to-use yet powerful, efficient, and robust environment</li><li>Frequent updates for maintenance improvements and new functionality</li></ul>ChromaTOF combines advanced qualitative and quantitative capabilities in one user-friendly platform and supports both <a target="_blank" rel="noopener noreferrer" href="https://gcms.labrulez.com/products?category=21&amp;manufacturerItems=24&amp;search=bt">Pegasus BT</a> and <a target="_blank" rel="noopener noreferrer" href="https://gcms.labrulez.com/products/38">Pegasus GC-HRT</a> instrument families.<h3>What Can ChromaTOF Do</h3><ul><li>Automatic tuning with report generation</li><li>Absolute quantitation using calibration curves</li><li>Relative quantitation based on reference or analyte curves</li><li>Quantitation using single-channel detectors (FID)</li><li>Importable workspace templates to speed up setup</li><li>Spectral deconvolution with library searches (NIST, Wiley, or user libraries)</li><li>Semi-quantitative analysis of non-calibrated compounds</li><li>Integrated control of LECO and Agilent sample handling systems</li><li>Automatic export to CSV, ANDI MS, NETCDF, or LECO formats</li><li>Compatibility with liquid nitrogen and consumable-free <a target="_blank" rel="noopener noreferrer" href="https://gcms.labrulez.com/products/44">GC×GC thermal modulators</a></li><li>GC×GC classification and method development tools</li><li>Integrated GC control</li><li>Unknown-unknown discovery using ChemSpider</li><li>Advanced calculation tools:<ul><li>Monoisotopic mass from molecular formula</li><li>Formula generation from measured mass</li><li>Required mass resolution for separating close masses</li></ul></li></ul>Licensing options: 90-day free trial, 1-year subscription, or perpetual license.<h3>Exclusive Features for Pegasus High-Resolution Models</h3><ul><li>Automated unknown identification using High-Resolution Deconvolution</li><li>Automatic fragment formula generation with mass accuracy reporting</li><li>Accurate <a target="_blank" rel="noopener noreferrer" href="https://gcms.labrulez.com/labrulez-bucket-strapi-h3hsga3/application::paper.paper/SEP_SCI_ACCURATE_MASS_LIBRARY_209-272.pdf">Mass Spectral Libraries</a> with AML Rank similarity scoring</li><li>User-scalable mass defect plots (e.g., Kendrick mass defect)</li><li><a target="_blank" rel="noopener noreferrer" href="https://gcms.labrulez.com/labrulez-bucket-strapi-h3hsga3/application::paper.paper/SPECTRAL_ANALYSIS_TOOL_SAT_209-262.pdf">Optional Spectral Analysis Tool</a> with Van Krevelen and CN vs. RDBE plots</li></ul><h3>Features for Pegasus Benchtop Models</h3><ul><li>Automated unknown identification using Non-Target Deconvolution</li><li>Full profile mass spectra acquisition at 35 kHz with better-than-nominal resolution</li></ul>

LECO GCxGC FLUX flow modulator

Flux GC×GC flow modulator simplifies GC×GC analysis using diverting flow principles. It offers robust, cost-effective modulation without cryogens, ideal for complex, concentrated samples.

Our innovative Flux GC×GC flow modulator was designed with one goal in mind—to make GC×GC more routine, accessible, and easier for you. The flow modulator's concept is based on the sound and easily understood principles first articulated by Seeley et al. on diverting flow. This extraordinarily simple design comprising of a cross shape and sideways T, is not only easy to setup and get started, but its ease-of-use makes it the most cost-effective option for GC×GC analysis.This flow-based modulator is perfect for those who want to perform robust GC×GC analysis, but who don't need the sensitivity of standard quad jet thermal modulation. Ideal samples should be complex, but relatively concentrated. Appropriate applications include petroleum and fragrance analyses such as the classic weathered crude oil example pictured below, which shows a GC×GC plot generated on our Pegasus® BT platform using the Flux flow modulator.<img src="https://storage.googleapis.com/labrulez-bucket-strapi-h3hsga3/ee943ea0acb34a8d9c5b72e7ace10666/obrazek_l.webp" alt="LECO GCxGC FLUX flow modulator" width="957" height="523"><h4>Theory of Operation: Diverting Flow</h4>The first and secondary capillary columns are connected together through a simple tube with a fixed gap between the columns. A flow of gas (helium) is then used to inject into the second column or divert to waste. The precision timing and flows are all handled by our integrated software, therefore you just have to click one button to setup and begin performing flow modulation GC×GC on our Pegasus BT platform.<img src="https://storage.googleapis.com/labrulez-bucket-strapi-h3hsga3/508b477dd1604d15855f26d786d5b1e4/obrazek_l.webp" alt="LECO GCxGC FLUX flow modulator" width="1026" height="488">Furthermore, no complex spreadsheets are needed to understand your method. This simple and robust design does not require cryogens to carry out GC×GC, which saves time and boosts efficiency in your lab.<img src="https://storage.googleapis.com/labrulez-bucket-strapi-h3hsga3/6796d4581c894291b9fab0088753cb8b/obrazek_l.webp" alt="LECO GCxGC FLUX flow modulator" width="918" height="545">

LECO QUADJET Thermal Modulator

Consumable-free dual-stage thermal jet modulator for GC×GC delivering on-column cryo-focusing, higher peak detectability, superior separation, and reliable performance without liquid nitrogen.

The QUADJET Thermal Modulator from LECO delivers industry-leading performance for comprehensive two-dimensional gas chromatography (GC×GC). Compared to alternative thermal or valve-based modulators, QUADJET stands out for its exceptional ruggedness, long-term reliability, and superior modulation efficiency.This GC×GC modulation system uses a dual-stage thermal jet modulator positioned between the first- and second-dimension columns. The design enables true on-column cryo-focusing, significantly enhancing peak sharpness, detectability, and separation power—especially for co-eluting compounds in complex sample matrices.<h3>Key benefits</h3><ul><li>Highest modulation performance for GC×GC Enhances peak detectability and improves separation of co-eluting compounds.</li><li>Dual-stage thermal jet design Provides efficient trapping and re-injection between columns.</li><li>On-column cryo-focusing Improves sensitivity and separation of closely eluting analytes.</li><li>Exceptional robustness and reliability Designed for routine, long-term GC×GC operation.</li></ul><h3>Thermal modulation without liquid nitrogen</h3>Unlike traditional cryogenic modulators, the QUADJET thermal modulator is consumable-free. It delivers the full performance benefits of thermal modulation without the need for liquid nitrogen, eliminating cryogen costs, logistical complexity, and downtime—while maintaining consistent, high-quality results.The QUADJET Thermal Modulator is an ideal choice for laboratories seeking maximum GC×GC performance with minimal operational burden, particularly in demanding applications involving highly complex samples.

LECO L-PAL3 GC Autosampler

LECO L-PAL3 GC Autosampler delivers flexible, discrimination-free GC injections with automated liquid, headspace, SPME, and ITEX sampling, high vial capacity, and minimal carryover.

Available exclusively from LECO, the L-PAL3 GC Autosampler is a highly robust, fully integrated autosampling platform designed for high flexibility and reliability in gas chromatography workflows. Based on proven CTC PAL3 technology, it supports discrimination-free ultrafast GC injections and minimizes carryover while ensuring precise and reproducible sample handling.Key innovations include automatic tool exchange (ATX) for seamless switching between liquid, headspace, SPME, and ITEX sampling modes, vial bottom sensing to prevent mis-injections, and high vial capacity for unattended operation. These features allow analysts to focus on compound identification without downtime or uncertainty.<h3>Key Features</h3><ul><li>Allows for automation of up to 162 two mL samples, or 45 ten/twenty mL samples.</li><li>Discrimination-free injection speeds with complete injection cycle time down to 100 milliseconds.</li><li>Bottom-sensing technology ensures that even very small volumes can be sampled.</li><li>Four separate models available so you may configure your package based on your autosampler needs.</li><li>Automatic Tool Exchange (ATX) allows users to switch between liquid, SPME, and headspace seamlessly.</li><li>96 to 384 well plate sampling supported; requires foil cutter.</li><li>Now available with Peltier cooled racks.</li></ul><h3>Available Configurations</h3><h4>L-PAL3 GC Autosampler – Liquid Injections</h4><ul><li>3-axis CTC-based autosampler/injector</li><li>Standard liquid injections</li><li>5-position solvent wash station</li><li>Liquid syringe tool</li><li>GC mounting kit</li><li>Single tray holder with 3 trays × 54 positions (2 mL vials)</li><li>Non-upgradable configuration</li></ul><h4>L-PAL3 GC Autosampler – Liquid &amp; Headspace Injections</h4><ul><li>Liquid and static headspace injections</li><li>Heated agitator</li><li>5-position solvent wash station</li><li>Liquid syringe tool + heated headspace syringe tool</li><li>GC mounting kit</li><li>Two tray holders:<ul><li>3 × 54 positions (2 mL vials)</li><li>3 × 15 positions (10/20 mL vials)</li></ul></li><li>Manual tool exchange between liquid and headspace modes</li></ul><h4>ITEX Dynamic Headspace Tool</h4><ul><li>Rapid, sensitive enrichment of volatile and semi-volatile compounds</li><li>Suitable for solid, liquid, and gaseous samples</li><li>Choice of adsorbents for optimal sensitivity</li><li>No sample loops, transfer lines, or valves → minimal contamination risk</li><li>ATX enables Headspace, SPME, and ITEX within a single sequence</li></ul><h4>L-PAL3 GC Autosampler – Liquid &amp; SPME Injections</h4><ul><li>Liquid injections and all SPME modes (immersion, headspace)</li><li>Heated agitator</li><li>5-position solvent wash station</li><li>Liquid syringe tool + SPME fiber tools</li><li>SPME fiber conditioning station</li><li>GC mounting kit</li><li>Two tray holders:<ul><li>3 × 54 positions (2 mL vials)</li><li>3 × 15 positions (10/20 mL vials)</li></ul></li><li>Manual tool exchange between liquid and SPME modes</li></ul><h3>L-PAL3 GC Autosampler – Liquid, Headspace &amp; SPME</h3><ul><li>Fully automated switching between liquid, headspace, and SPME</li><li>Heated agitator</li><li>5-position solvent wash station</li><li>Tools for liquid syringe, headspace syringe, and SPME fibers</li><li>SPME fiber conditioning station</li><li>GC mounting kit</li><li>Two tray holders:<ul><li>3 × 54 positions (2 mL vials)</li><li>3 × 15 positions (10/20 mL vials)</li></ul></li></ul>

LECO Simply GC×GC®

Simply GC×GC from LECO guides users through the steps of creating an optimized GC×GC method or converting an existing 1D GC method for complex samples.

Simply GC×GC from LECO is a free tool designed to walk users through the steps of creating an optimized GC×GC method for complex samples.The tool allows users to create a GC×GC method from scratch or convert an existing 1D GC method to GC×GC.Simply GC×GC provides logical, step-by-step instructions, for example for:<ul><li>setting the secondary oven offset,</li><li>setting the second-dimension column length,</li><li>experimentally evaluating stationary phases and peak capacity.</li></ul>Simply GC×GC takes a simple approach to GC×GC and helps users avoid unnecessary testing while streamlining the method development cycle.

Products distributed by LECO Instrumente Plzeň - page 5

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