dia-PASEF Visualization Tool: a shiny App for data visualization and exploration of dia-PASEF data

ASMS 2025 timsplot: A Python Shiny App for Visualizing timsTOF Proteomics Results Zachary J. Kirsch1, Manubhai Kadayil Prabhakaran1, Diego Assis1, Ruben Shrestha2, and Matthew Willetts1 1Bruker Scientific, Billerica, MA, 2Bruker Scientific, San Jose, CA Introduction The timsTOF platform has garnered…

US HUPO 2024, ABSTRACT 663 Automated and faster library-free dia-PASEF analysis with a Spectronaut integrated workflow in ProteoScape Javier Lopez1, Sven Brehmer1, Grzegorz Skoraczynski2, Jose Abuin1, Tejas Gandhi2, Oliver Bernhardt2, Lukas Reiter2, Dennis Trede1, Jonathan Krieger3 and Tharan Srikumar3 1Bruker…

ASMS2025, TP192 Benchmarking diagonal-PASEF data acquisition for high-throughput proteomics applications Christopher Below1, Oliver M. Bernhardt1, Stephanie Kaspar-Schoenefeld2, Roland Bruderer1, Shourjo Ghose3, Tejas Gandhi1, Jonathan Krieger4, Markus Lubeck2, Lukas Reiter1 More details: 1Biognosys AG, Zurich, Switzerland, 2Bruker Daltonics GmbH & Co…

US HUPO 2024 Improved dia-PASEF isolation window schemes for proteomics measurements Shourjo Ghose1, Markus Lubeck2, Stephanie Kaspar-Schoenefeld2, Christoph Krisp2, Andreas Schmidt2 Florian Busch2, Eduardo Carrascosa2, Oliver Raether2, Gary Kruppa3 1 Bruker Scientific LLC, Billerica, MA, 2 Bruker Daltonics GmbH &…