Understanding Quantification Algorithms in Proteome Discoverer software

RECORD | Already taken place We, 31.12.2025

Free Proteome Discoverer 3.2 workshop: quantification nodes, Minora, Feature Mapper, normalization, and protein ratio workflows.

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Thermo Fisher Scientific: Proteome Discoverer Software Online Workshops

This free Thermo Scientific Proteome Discoverer Software online workshop is suitable for both novice and intermediate users. Participants will also have the opportunity to ask questions related to handling quantitation in Proteome Discoverer software.

Topics

The workshop will cover the following topics in Proteome Discoverer 3.2:

Abundance value
Quantification nodes in Processing and Consensus Workflows
Minora Feature Detector
- Steps in feature detection
- Parameters
Feature Mapper
- Processing steps in the Feature Mapper node
- Parameters
Precursor Ions Quantifier
- Parameters (shared peptides, shared quan results, replicate threshold, modification handling)
- Normalization
- Scaling
- Missing value imputation
Protein ratio calculation

Thermo Fisher Scientific

Understanding Quantification Algorithms in Proteome Discoverer software

Topics

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